Repository series · ncbi-prjna1449514
Pseudomonas sp. FA-1 Genome sequencing
Whole genome sequencing of a tick-associated Pseudomonas sp. isolated from Hyalomma dromedarii ticks collected from camels at Hail Province, Saudi Arabia. Average nucleotide identity analysis (87.5% to the closest relative, P. guariconensis type strain LMG 27394) and digital DNA-DNA hybridization (dDDH 32.9%) indicate this isolate represents a potentially novel genomospecies within the P. putida group. The genome was assembled using SPAdes from Illumina paired-end reads, yielding a 5.1 Mb draft genome (38 contigs at 500 bp or greater, N50 363 kb, GC 63.75%). Annotation by Prokka identified 4,541 protein-coding genes, 77 tRNAs, and 5 rRNAs. AMR screening detected only intrinsic efflux pump genes (MexAB-OprM, MexCD-OprJ, MexEF-OprN) with no acquired resistance determinants. This project supports characterization of tick-associated bacteria and antimicrobial resistance surveillance in arthropod vectors from Saudi Arabia.
The accession and its GCC connection are verified. Registration alone does not establish that the broader research programme remains active.
01 / Project overview
What the record establishes.
- Geographic scope
- Saudi Arabia connection indexed in BioProject metadata
- Project type
- Repository project
- Research domain
- Pathogen genomics and infectious disease
- Years
- 2026–
- Lifecycle status
- repository_recorded
- Status basis
- Registered in NCBI BioProject on 2026/04/06; operational lifecycle is not asserted.
- Status evidence date
- 2026-04-06
- Scale
- 1 BioProject accession grouped by matching submitter, date, data type and narrative.
02 / Organizations and population
Who and what the project connects.
- Lead organizations
- King Saud University
- Partner organizations
- Not stated
- Organism / population
- Pseudomonas sp. FA-1
03 / Data and access
What exists and how it can be reached.
Data types
- Genome sequencing
- Sequencing
- Genome
Data access
Public repository metadata with linked data where supplied by the submitter
Identifiers
- BioProject
PRJNA1449514
04 / Evidence and provenance
Why the record is included.
Inclusion basis
Exact country-name match in authoritative NCBI BioProject metadata; repeated submissions are grouped into one Atlas series.
Editorial note
Repository verification confirms the accession and regional connection, not whether the broader research programme remains active.
Sources
- primary record source Verified 2026-08-15
Release v0.2.0