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Repository series · ncbi-prjna816447

Understanding the role of GLUT2 in dysglycemia associated with Fanconi-Bickel syndrome (RNA-Seq)

QatarHuman health and population genomicsRepository record

Fanconi–Bickel Syndrome (FBS) is a rare disorder of carbohydrate metabolism that is characterized by the accumulation of glycogen mainly in the liver. It is inherited in an autosomal recessive manner due to mutations in the SLC2A2 gene. SLC2A2 encodes for the glucose transporter GLUT2 and is expressed in tissues that are involved in glucose homeostasis. The molecular mechanisms of dysglycemia in FBS are still not clearly understood. In this study, we report two cases of FBS with classical phenotypes of FBS associated with dysglycemia. Genomic DNA was extracted and analyzed by whole-genome and Sanger sequencing, and patient PBMCs were used for molecular analysis. One patient had an exonic SLC2A2 mutation (c.1093C > T in exon 9, R365X), while the other patient had a novel intronic SLC2A2 mutation (c.613-7T>G). Surprisingly, the exonic mutation resulted in the overexpression of dysfunctional GLUT2, resulting in the dysregulated expression of other glucose transporters. The intronic mutation did not affect the coding sequence of GLUT2, its expression, or glucose transport activity. However, it was associated with the expression of miRNAs correlated with type 1 diabetes mellitus, with a particular significant overexpression of hsa-miR-29a-3p implicated in insulin production and secretion. Our findings suggest that SLC2A2 mutations cause dysglycemia in FBS either by a direct effect on GLUT2 expression and/or activity or, indirectly, by the dysregulated expression of miRNAs implicated in glucose homeostasis. Overall design: RNAseq analysis of PBMCs for Patients and Healthy Controls PBMCs

Repository interpretation

The accession and its GCC connection are verified. Registration alone does not establish that the broader research programme remains active.

01 / Project overview

What the record establishes.

Geographic scope
Qatar connection indexed in BioProject metadata
Project type
Repository project
Research domain
Human health and population genomics
Years
2022–
Lifecycle status
repository_recorded
Status basis
Registered in NCBI BioProject on 2022/03/15; operational lifecycle is not asserted.
Status evidence date
2022-03-15
Scale
1 BioProject accession grouped by matching submitter, date, data type and narrative.

02 / Organizations and population

Who and what the project connects.

Lead organizations
In collaboration with Department of Biomedical Sciences, Research Department - Maternal and Child Health Program, Sidra Medicine and Qatar University
Partner organizations
Not stated
Organism / population
Homo sapiens

03 / Data and access

What exists and how it can be reached.

Data types

  • Transcriptome or Gene expression
  • Sequencing
  • Transcriptome

Data access

Public repository metadata with linked data where supplied by the submitter

Identifiers

  • BioProjectPRJNA816447

04 / Evidence and provenance

Why the record is included.

Inclusion basis

Exact country-name match in authoritative NCBI BioProject metadata; repeated submissions are grouped into one Atlas series.

Editorial note

Repository verification confirms the accession and regional connection, not whether the broader research programme remains active.

Sources

  1. primary record source Verified 2026-08-15

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