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Repository series · ncbi-prjna1294752

Cathelicidin LL-37-induced transcriptome of human keratinocyte identifies chemokine CXCL10 link to T cell-mediated rosacea pathogenesis via JAK-1/STAT-1 pathway

QatarPathogen genomics and infectious diseaseRepository record

Rosacea is a chronic inflammatory disease of facial skin with unknown pathophysiology. Abnormal overexpression of human antimicrobial peptide LL-37 is a hallmark of rosacea. However, its significance in the rosacea pathogenesis is not fully understood. We sought to understand the molecular mechanisms of LL-37-mediated rosacea-like inflammation in an in-vitro model of normal human epidermal keratinocytes. Transcriptome profiling of LL-37-treated keratinocytes identified signatures of interferon (IFN)-stimulating genes (ISGs) such as CXCL10, IFIT2, RSAD2 and CXCL11 among the top upregulated differentially expressed genes. Gene ontogeny (GO) enrichment of biological processes revealed activation of cellular response to molecules of bacterial origin, response to chemokines, and cytokine mediated signaling pathways. While KEGG enrichment analysis revealed the activation of TNF signaling, IL-17 signaling, NF-kB signaling and chemokine signaling among the most significant pathways. Remarkably, T cell recruiting chemokine CXCL10 turns out to be the most abundant inflammatory mediator overexpressed upon LL-37 exposure. Mechanistically, LL-37 induced CXCL10 production relied on JAK-1/STAT-1 signaling pathway. In summary, our findings provide a crucial link to keratinocyte: T cell crosstalk and blockade of CXCL10:CXCR3 axis or JAK-1/STAT-1 pathways can be an effective anti-inflammatory strategy to reduce rosacea inflammation by restricting pathogenic T cells infiltration. Overall design: Primary keratinocytes (NHEK) from three healthy donors were stimulated with or without LL-37 in a 6-well collagen 1-coated culture plate for 6-hours. Cells were lysed and RNA was isolated using RNAeasy Mini kit (Qiagen). RNA was further processed for Affymetrix microarray.

Repository interpretation

The accession and its GCC connection are verified. Registration alone does not establish that the broader research programme remains active.

01 / Project overview

What the record establishes.

Geographic scope
Qatar connection indexed in BioProject metadata
Project type
Repository project
Research domain
Pathogen genomics and infectious disease
Years
2025–
Lifecycle status
repository_recorded
Status basis
Registered in NCBI BioProject on 2025/07/22; operational lifecycle is not asserted.
Status evidence date
2025-07-22
Scale
1 BioProject accession grouped by matching submitter, date, data type and narrative.

02 / Organizations and population

Who and what the project connects.

Lead organizations
Weill Cornell Medicine Qatar
Partner organizations
Not stated
Organism / population
Homo sapiens

03 / Data and access

What exists and how it can be reached.

Data types

  • Transcriptome or Gene expression
  • Array
  • Transcriptome

Data access

Public repository metadata with linked data where supplied by the submitter

Identifiers

  • BioProjectPRJNA1294752

04 / Evidence and provenance

Why the record is included.

Inclusion basis

Exact country-name match in authoritative NCBI BioProject metadata; repeated submissions are grouped into one Atlas series.

Editorial note

Repository verification confirms the accession and regional connection, not whether the broader research programme remains active.

Sources

  1. primary record source Verified 2026-08-15

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