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سجل مستودعي · ncbi-prjeb50277

Nation-wide surveillance of carbapenem resistant Enterobacteriaceae in the United Arab Emirates

الإماراتPathogen genomics and infectious diseaseRepository record

While CRE is appreciated as a major problem in countries of the Arabian Peninsula, no nation-wide surveillances have been carried out in the region. Here we report on the first such study from the UAE. Between the 1st of July of 2018 and 31st of March 2019, 504 consecutive non-repeat CRE isolates (75.2% of them Klebsiella pneumoniae) were collected from 15 hospitals of the 7 Emirates and subjected to susceptibility testing, PCR-detection of resistance genes and molecular typing by PFGE and cgMLST. Molecular analysis identified four major K. pneumoniae PFGE groups, members of which belonged to ST14 (and its SLVs: ST2096 and ST78) representing 40.6% of K. pneumoniae strains, ST231, CC147 and ST15. , ST14 group members were significantly more likely to be XDR, PDR or resistant to ceftazidime-avibactam, colistin, tigecycline than other K. pneumoniae, and they were present in all but a small hospital. cgMLST identified multiple clusters within ST14, some widespread in the country while others concentrating in specific hospitals. One of them in Qassimi hospital (Sharjah), produced OXA-48-like carbapenemase, while another one (Saqr hospital (RAK)) produced mostly NDM with consequent resistance to ceftazidime-avibactam.

تفسير سجل المستودع

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01 / نظرة عامة على المشروع

ما الذي يثبته السجل.

النطاق الجغرافي
United Arab Emirates connection indexed in BioProject metadata
نوع المشروع
Repository project
مجال البحث
Pathogen genomics and infectious disease
السنوات
2022–
حالة المشروع
repository_recorded
أساس تحديد الحالة
Registered in NCBI BioProject on 2022/05/20; operational lifecycle is not asserted.
تاريخ دليل الحالة
2022-05-20
الحجم
1 BioProject accession grouped by matching submitter, date, data type and narrative.

02 / المؤسسات والمجتمع

من وما الذي يربطه المشروع.

الجهات القائدة
PTE Medical Microbiology
الجهات الشريكة
غير مذكور
الكائن / المجتمع
Not stated

03 / البيانات والإتاحة

ما الموجود وكيف يمكن الوصول إليه.

أنواع البيانات

  • Other
  • Sequencing
  • Genome

إتاحة البيانات

Public repository metadata with linked data where supplied by the submitter

المعرّفات

  • BioProjectPRJEB50277

04 / الدليل والمصدر

لماذا أُدرج هذا السجل.

أساس الإدراج

Exact country-name match in authoritative NCBI BioProject metadata; repeated submissions are grouped into one Atlas series.

ملاحظة تحريرية

Repository verification confirms the accession and regional connection, not whether the broader research programme remains active.

المصادر

  1. primary record source تم التحقق في 2026-08-15

الإصدار v0.2.0

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