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سجل مستودعي · ncbi-prjeb26553

ERG6 and ERG2 are major targets conferring reduced susceptibility to amphotericin B in clinical Candida glabrata isolates in Kuwait

الكويتPathogen genomics and infectious diseaseRepository record

Objectives: Candida glabrata is intrinsically less susceptible to azoles and resistance to echinocandins and amphotericin B has also been detected. Molecular mechanisms of reduced susceptibility (RS) to amphotericin B (AMB) were investigated in C. glabrata strains in Kuwait by sequence analyses of genes involved in ergosterol biosynthesis. Methods: Eight RS-AMB and 5 AMB-susceptible C. glabrata isolates were used. Antifungal susceptibility testing was done by Etest and by reference broth microdilution. PCR-sequencing of three (ERG2, ERG6 and ERG11) genes was performed by using gene-specific primers. Total cell sterol content was analyzed by gas chromatography-mass spectrometry. Phylogenetic relationship among the isolates was investigated by multilocus sequence typing. Results: AMB-susceptible isolates contained only synonymous mutations in ERG2, ERG6 or ERG11 and total sterol content of 1 isolate was similar to reference strain. A nonsynonymous (AGA48AAA, R48K) ERG6 mutation was found in both RS-AMB and AMB-susceptible isolates. Four RS-AMB isolates contained novel nonsense mutations at Trp286/Tyr192/Leu341 and two isolates contained nonsynonymous (V126F or C198F) mutation in ERG6 and their sterol content were consistent with ERG6 deficiency. Two other RS-AMB isolates contained novel nonsynonymous (G119S or G122S) ERG2 mutation and their sterol content were consistent with ERG2 deficiency. Isolate Kw861/13 also contained Y141H + L381M mutations while 7 RS-AMB isolates contained only synonymous mutations in ERG11. All isolates with ERG6/ERG2/ERG11 mutations were genotypically distinct strains. Conclusions: Our data show that ERG6 and ERG2 are major targets conferring RS-AMB in clinical C. glabrata isolates in Kuwait.

تفسير سجل المستودع

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01 / نظرة عامة على المشروع

ما الذي يثبته السجل.

النطاق الجغرافي
Kuwait connection indexed in BioProject metadata
نوع المشروع
Repository project
مجال البحث
Pathogen genomics and infectious disease
السنوات
2018–
حالة المشروع
repository_recorded
أساس تحديد الحالة
Registered in NCBI BioProject on 2018/05/03; operational lifecycle is not asserted.
تاريخ دليل الحالة
2018-05-03
الحجم
1 BioProject accession grouped by matching submitter, date, data type and narrative.

02 / المؤسسات والمجتمع

من وما الذي يربطه المشروع.

الجهات القائدة
Kuwait University
الجهات الشريكة
غير مذكور
الكائن / المجتمع
Not stated

03 / البيانات والإتاحة

ما الموجود وكيف يمكن الوصول إليه.

أنواع البيانات

  • Other
  • Sequencing
  • Genome

إتاحة البيانات

Public repository metadata with linked data where supplied by the submitter

المعرّفات

  • BioProjectPRJEB26553

04 / الدليل والمصدر

لماذا أُدرج هذا السجل.

أساس الإدراج

Exact country-name match in authoritative NCBI BioProject metadata; repeated submissions are grouped into one Atlas series.

ملاحظة تحريرية

Repository verification confirms the accession and regional connection, not whether the broader research programme remains active.

المصادر

  1. primary record source تم التحقق في 2026-08-15

الإصدار v0.2.0

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